docs: update README JiraTools methods, add MEMORY rules, fix config entity

AGENT.memory.md

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+# MEMORY AGENT RULES
+
+## TRIGGERS — ALWAYS CHECK
+- **ON session_start**: read_graph OR search_nodes(<topic>)
+- **ON significant_change**: create_entities OR add_observations
+- **ON file_operation**: log to memory if architecture/config/decision
+
+## KEY FORMAT
+- **PREFIX**: `lazybear/`
+- **KEY**: `lazybear/<type>/<n>` (ex: lazybear/bug/auth-fail)
+- **ONE_TYPE_PER_ENTITY**: true
+
+## ALLOWED TYPES
+- architecture | mcp_tool | decision | bug | config | task_log
+
+## MACHINE-FIRST PRINCIPLES
+- ALWAYS use memory for project context, architecture, and decisions
+- READ graph before coding or making assumptions
+- Don't duplicate observations
+- Update memory when state changes significantly
+
+## SCHEMA
+```
+lazybear/{architecture|mcp_tool|decision|bug|config|task_log}/{entity-name}
+```
+
+## READING PRIORITY
+1. Check graph before coding
+2. Search nodes for existing context
+3. Don't duplicate observations
+
+## WRITING TRIGGERS
+- **Architecture**: create `architecture` entity
+- **New MCP tools**: create `mcp_tool` entity
+- **Major decisions**: create `decision` entity
+- **Config updates**: create `config` entity
+- **Completed tasks**: create/update `task_log` entity